It's hard to comment without seeing it.
There are many variants by Yamaha of the 14mm m/c. Earlier in this thread I showed you mine which has totally different piston, so its important to get the one you need.
I suspect you have

Its important to lubricate the bore and seals before attempting to assemble with the hydraulic oil you plan to use. The one I've just done, the primary seal was supplied loose and I had to think about how to fit without overstretching and making sure it was the right way round. Both seals are like cups, as the brake is activated the cups expand as they push the oil forward giving a very tight pressure seal. When you release the lever, removing pressure, the spring returns the piston the cups of the seals collapse (but still seal) allowing the piston to return.
It's annoying when we get a leak we have to buy a full reconditioning kit when we only need a 50p seal

But nobody will sell them to you

My son's Diversion had problem with m/c and after kit still leaking, gave up and bought Chinese pattern with lever and matching clutch for less than the kit

However he's not worried about originality

The bleed nipple, well what's wrong with reusing the old. Do fit a cap to keep crap out.